Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907670.1_cds_XP_016457772.1_51463
CDS Infomation

[gene=LOC107781560] [db_xref=GeneID:107781560] [protein=protein CUP-SHAPED COTYLEDON 1-like] [protein_id=XP_016457772.1] [location=join(79325..79499,80858..81129,82061..82591)] [gbkey=CDS]
Sequence

ATGGAATTAGAAGTGAATAAAGAAGAGAGTAGTCTACCACCAGGATTCAGATTTCATCCA
ACAGATGAAGAGCTAATAACATATTATCTTGTGAACAAGATTTCTGATGCTAGTTTTACT
GGAAGGGCTATTGCAGATGTTGATCTTAACAAATCTGAGCCCTGGGATCTTCCAGGGAAG
GCAAAAATGGGAGGAAAAGAATGGTATTTCTTCAGCCTTCGCGATCGGAAATACCCAACT
GGAGTGAGAACAAATAGAGCTACAAATACTGGATATTGGAAAACTACTGGCAAAGACAAG
GAGATATTCAGTAGTAAAACTTCAGAATTAGTTGGTATGAAAAAAACATTGGTTTTCTAT
AAAGGAAGAGCTCCAAGAGGAGAGAAATCAAATTGGGTGATGCATGAATATAGAATTCGA
TCCAAATCCTCTTATAGAACAAACAAGCAAGACGAGTGGGTGGTTTGCCGAATCTTCCAG
AAGAGTGCAGGATTGAAGAAGTACCCTACTAACCATTCAAGGACAGTAGTTAATCCCTAT
TCTCTAGAGATCAATCAAAATGCAATATCCTCACAAATAATGATGCAACCTGATCATGGC
TTCCAATTTGCAATGGGAAGAAATTACATAAACCATGCATCTAATTATATGAACAATTTC
CCAATACAACAACCCCAAATGAATTACAATATCGGAGGTAGTAGTAGTGGTGGTGGTGGT
GGAGGAGGAGATAATTTTTTTACTATTTCAGGCTTAAACTTGAATCTTGGTGGTGGTGCC
GCCGCCTCGTCTCAGCCAGTTTTAAGGCCAATGCCGCCGCCGCCGCCACCACCAACACAA
GTTATGAATATTCAACAAGAAGTGATGACTTCTTCTATGTTGGATAATTGTGCAATTACA
AGTGAGGCAGGTTATGGGGCAGAAATGAATAGTGCAAATTATTGTGCTGATTTAGACAAC
TATTGGGCTACTTATTGA

Peptide Sequence

PEP ID

XP_016457772.1
PEP Infomation

PREDICTED: protein CUP-SHAPED COTYLEDON 1-like [Nicotiana tabacum]
Sequence

MELEVNKEESSLPPGFRFHPTDEELITYYLVNKISDASFTGRAIADVDLNKSEPWDLPGK
AKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFSSKTSELVGMKKTLVFY
KGRAPRGEKSNWVMHEYRIRSKSSYRTNKQDEWVVCRIFQKSAGLKKYPTNHSRTVVNPY
SLEINQNAISSQIMMQPDHGFQFAMGRNYINHASNYMNNFPIQQPQMNYNIGGSSSGGGG
GGGDNFFTISGLNLNLGGGAAASSQPVLRPMPPPPPPPTQVMNIQQEVMTSSMLDNCAIT
SEAGYGAEMNSANYCADLDNYWATY

Transcript Sequence

Gene sequence data has not been registered.